wiki:EpiNetSim_Lectures

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EpiNetSim Course : Location | Lectures | Homework | Projects | Installation | Discussion

A 1 week intensive course on:

Network Modeling of Infectious Disease

Lectures and Lab Code

Day 1: Introduction to epidemic modeling

Lecture:

Morning Lecture on SIR models (pdf)
Afternoon Lecture on coding SIR models (pdf)
SIR coding lab (docx)

Lab Code:

Stochastic Code (zip/R)
Deterministic Code (zip/R)

Day 2: Network analysis: Traditional methods and Exponential Random Graph Models

Lecture:

Morning Lecture (DCMs and Traditional SNA)(pdf)
Afternoon Lecture (ERGMs)(pdf)

Lab Tutorial:

ERGM tutorial (pdf)

Lab Code:

sna lab Code (R)
ergm lab Code (R)
egosim lab Code (R)

Data:

example network data
example nodal attribute data

Day 3: Modeling epidemics on networks: Independent network and epidemic processes

Lecture:

STERGM Lecture Slides (pdf)

Lab Tutorial:

STERGM Tutorial (pdf)

Lab Code:

Egocentric sample simulation
STERGM Lab (R)

Day 4: Modeling epidemics on networks: Dependent network and epidemic processes

Lecture:

EpiNetSim Lecture Slides (pdf)

Code:

Epidemic Code zip tar

Last modified 7 years ago Last modified on 11/28/12 15:44:12

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